Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL22A1Q8NFW1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 AC106827.1-201ENST00000366454 431 ntBASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 MIR1301-201ENST00000408518 82 ntBASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 AC021305.1-201ENST00000520656 1514 ntBASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 AC013726.1-201ENST00000563747 2285 ntBASIC19.7■□□□□ 0.74
COL22A1Q8NFW1 REXO1L2P-201ENST00000425429 2069 ntBASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 ACTG1P19-201ENST00000418987 1116 ntBASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 RN7SL530P-201ENST00000485097 298 ntBASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 GDNF-207ENST00000515058 764 ntTSL 5 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 AL359258.3-201ENST00000622910 2331 ntBASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 IGHEP1-201ENST00000521393 651 ntBASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL22A1Q8NFW1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 AC092580.1-201ENST00000433998 658 ntBASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 RPL3P5-201ENST00000441645 1232 ntBASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 AC021016.3-201ENST00000608367 477 ntBASIC19.68■□□□□ 0.74
COL22A1Q8NFW1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms