Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 RPL7P35-201ENST00000446943 740 ntBASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 AP000356.3-201ENST00000382243 753 ntBASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 RN7SL258P-201ENST00000478664 300 ntBASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 AC007718.1-201ENST00000621078 280 ntBASIC23.32■■□□□ 1.32
CFAP43Q8NDM7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 AL157792.1-201ENST00000488281 530 ntBASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 AC100827.2-201ENST00000563214 1194 ntBASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CFAP43Q8NDM7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 KRT18P36-201ENST00000411618 1276 ntBASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 FAM58BP-201ENST00000439056 645 ntBASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 PUDPP3-201ENST00000445368 636 ntBASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 AL157813.1-201ENST00000612996 587 ntBASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFAP43Q8NDM7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 AC020910.5-201ENST00000623668 1865 ntBASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC23.29■■□□□ 1.32
CFAP43Q8NDM7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms