Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC112492.5-201ENST00000421897 457 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC068587.3-201ENST00000526613 355 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC106886.1-201ENST00000568660 600 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 BTNL10-201ENST00000595971 695 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC233724.13-201ENST00000598383 410 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC025181.2-201ENST00000606994 802 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AL008721.1-201ENST00000609964 604 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 AC018665.1-201ENST00000622927 1362 ntBASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.09■□□□□ 0.01
TRIM48Q8IWZ4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TRIM48Q8IWZ4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.08■□□□□ 0
TRIM48Q8IWZ4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 ACA64.2-201ENST00000459014 129 ntBASIC15.08■□□□□ 0
TRIM48Q8IWZ4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 SLC25A47P1-201ENST00000531577 414 ntBASIC15.08■□□□□ 0
TRIM48Q8IWZ4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.08■□□□□ 0
TRIM48Q8IWZ4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms