Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 CETN4P-206ENST00000642099 2168 ntBASIC15.31■□□□□ 0.04
APLFQ8IW19 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APLFQ8IW19 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.31■□□□□ 0.04
APLFQ8IW19 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.31■□□□□ 0.04
APLFQ8IW19 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.31■□□□□ 0.04
APLFQ8IW19 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
APLFQ8IW19 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.31■□□□□ 0.04
APLFQ8IW19 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.31■□□□□ 0.04
APLFQ8IW19 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 AL359881.2-201ENST00000602973 570 ntBASIC15.31■□□□□ 0.04
APLFQ8IW19 SPTSSB-204ENST00000617024 1292 ntBASIC15.31■□□□□ 0.04
APLFQ8IW19 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.31■□□□□ 0.04
APLFQ8IW19 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.31■□□□□ 0.04
APLFQ8IW19 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APLFQ8IW19 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
APLFQ8IW19 AL512652.2-201ENST00000625156 1716 ntBASIC15.31■□□□□ 0.04
APLFQ8IW19 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.31■□□□□ 0.04
APLFQ8IW19 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
APLFQ8IW19 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
APLFQ8IW19 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.3■□□□□ 0.04
APLFQ8IW19 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.3■□□□□ 0.04
APLFQ8IW19 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.3■□□□□ 0.04
APLFQ8IW19 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 MEIS3P1-201ENST00000495167 958 ntBASIC15.3■□□□□ 0.04
APLFQ8IW19 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
APLFQ8IW19 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.3■□□□□ 0.04
APLFQ8IW19 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.3■□□□□ 0.04
APLFQ8IW19 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 TEX28P1-201ENST00000613479 1221 ntBASIC15.3■□□□□ 0.04
APLFQ8IW19 TEX28P2-201ENST00000617764 1221 ntBASIC15.3■□□□□ 0.04
APLFQ8IW19 AC027601.5-201ENST00000624065 2482 ntBASIC15.3■□□□□ 0.04
APLFQ8IW19 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.3■□□□□ 0.04
APLFQ8IW19 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.3■□□□□ 0.04
APLFQ8IW19 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
APLFQ8IW19 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APLFQ8IW19 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
APLFQ8IW19 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
APLFQ8IW19 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.29■□□□□ 0.04
APLFQ8IW19 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APLFQ8IW19 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
APLFQ8IW19 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
APLFQ8IW19 KRT8P39-201ENST00000396270 1433 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms