Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PCDHA14-201ENST00000506751 2298 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AL583805.1-201ENST00000391389 531 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 MIR1227-201ENST00000408484 88 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AP000358.1-201ENST00000456260 156 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AC006122.1-201ENST00000493323 440 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AC005357.2-202ENST00000590507 1060 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 SIGLEC18P-201ENST00000602271 909 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AC027601.3-201ENST00000622907 509 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 AL603832.2-201ENST00000566195 2125 ntBASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT28Q7Z3Y7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 CYP4F23P-201ENST00000593402 1579 ntBASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 MIR4522-201ENST00000584932 87 ntBASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 AL132780.4-201ENST00000624870 1135 ntBASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRT28Q7Z3Y7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 AL627422.1-201ENST00000434104 580 ntBASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 AL645933.1-201ENST00000440087 609 ntBASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 RPL18AP3-201ENST00000462885 528 ntBASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 AL139384.1-201ENST00000612143 3047 ntBASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 LINC01165-201ENST00000445190 1623 ntBASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT28Q7Z3Y7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms