Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 SPDYE22P-201ENST00000582158 798 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 AL132655.2-201ENST00000596276 594 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 AC025048.6-201ENST00000634326 1161 ntBASIC14.15□□□□□ -0.14
ZNF550Q7Z398 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF550Q7Z398 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
ZNF550Q7Z398 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.15□□□□□ -0.15
ZNF550Q7Z398 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
ZNF550Q7Z398 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 AC007541.1-201ENST00000570282 1469 ntBASIC14.14□□□□□ -0.15
ZNF550Q7Z398 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZNF550Q7Z398 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF550Q7Z398 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms