Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
KCNIP4Q6PIL6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.95□□□□□ -0.5
KCNIP4Q6PIL6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.95□□□□□ -0.5
KCNIP4Q6PIL6 AC105206.1-202ENST00000314927 2368 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 KRT18P35-201ENST00000510488 1269 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC099336.1-202ENST00000602961 463 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC010331.1-201ENST00000611423 582 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AL358472.4-201ENST00000633140 710 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 NSUN5P1-202ENST00000421140 1535 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 NSUN5P2-203ENST00000457352 1529 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 AC134407.2-201ENST00000625089 1978 ntBASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.94□□□□□ -0.5
KCNIP4Q6PIL6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AL845331.1-201ENST00000424978 1190 ntBASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 TPSP2-201ENST00000561760 610 ntBASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms