Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CASC4Q6P4E1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 KRT18P13-201ENST00000400056 1290 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 TSEN15P1-201ENST00000423257 515 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 DNAJB3-202ENST00000449667 1266 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 HLA-V-204ENST00000476601 1289 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 AC125807.1-201ENST00000483097 614 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 Z92544.3-201ENST00000624747 417 ntBASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CASC4Q6P4E1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 AL133267.1-201ENST00000398220 340 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 AC015922.1-201ENST00000421102 1152 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 HLA-J-203ENST00000494367 1087 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 AC004449.1-201ENST00000564240 433 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 LINC01115-203ENST00000606068 577 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 TEX28P1-201ENST00000613479 1221 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 AL138828.2-201ENST00000615812 383 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 TEX28P2-201ENST00000617764 1221 ntBASIC15.69■□□□□ 0.1
CASC4Q6P4E1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms