Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AL132655.2-201ENST00000596276 594 ntBASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 LINC02084-201ENST00000606069 1096 ntBASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AC004233.3-201ENST00000607794 1269 ntBASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AL158212.4-201ENST00000624062 1286 ntBASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KHDC1Q4VXA5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 MEIS3P1-201ENST00000495167 958 ntBASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 TPRX2P-201ENST00000535362 881 ntBASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 TIMM17BP1-201ENST00000545713 516 ntBASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 AC190387.1-201ENST00000551683 408 ntBASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.55■□□□□ 0.08
KHDC1Q4VXA5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 AC007541.1-201ENST00000570282 1469 ntBASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 AC005252.3-201ENST00000623855 2258 ntBASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KHDC1Q4VXA5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms