Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 MIR769-201ENST00000390225 118 ntBASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 ACTBP8-201ENST00000403258 1108 ntBASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 COX5BP1-201ENST00000507622 393 ntBASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AP001505.2-201ENST00000616815 443 ntBASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 LINC02447-202ENST00000501888 2146 ntBASIC16.33■□□□□ 0.21
CTC1Q2NKJ3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 NKAIN1P1-201ENST00000435754 582 ntBASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 ECM1P1-201ENST00000604092 1279 ntBASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 AC138649.2-201ENST00000615886 705 ntBASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 AC244517.3-201ENST00000616254 1235 ntBASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 BX539320.1-201ENST00000623759 877 ntBASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTC1Q2NKJ3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTC1Q2NKJ3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms