Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.14■□□□□ 0.49
PDS5AQ29RF7 CALR4P-201ENST00000431943 946 ntBASIC18.14■□□□□ 0.49
PDS5AQ29RF7 SCARNA20.5-201ENST00000516991 142 ntBASIC18.14■□□□□ 0.49
PDS5AQ29RF7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 AC005730.2-201ENST00000564549 1184 ntBASIC18.14■□□□□ 0.49
PDS5AQ29RF7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 AC007663.3-201ENST00000609632 465 ntBASIC18.14■□□□□ 0.49
PDS5AQ29RF7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDS5AQ29RF7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.13■□□□□ 0.49
PDS5AQ29RF7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 SERPINA13P-202ENST00000478994 924 ntBASIC18.13■□□□□ 0.49
PDS5AQ29RF7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 AL023803.2-201ENST00000620080 638 ntBASIC18.13■□□□□ 0.49
PDS5AQ29RF7 AC022748.3-201ENST00000621828 275 ntBASIC18.13■□□□□ 0.49
PDS5AQ29RF7 AC244452.3-201ENST00000636814 210 ntBASIC18.13■□□□□ 0.49
PDS5AQ29RF7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDS5AQ29RF7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 SHC1P1-201ENST00000425230 1745 ntBASIC18.12■□□□□ 0.49
PDS5AQ29RF7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 AC131206.1-201ENST00000538078 1211 ntBASIC18.12■□□□□ 0.49
PDS5AQ29RF7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 BX088702.1-201ENST00000610784 235 ntBASIC18.12■□□□□ 0.49
PDS5AQ29RF7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 AL162426.1-201ENST00000624141 743 ntBASIC18.12■□□□□ 0.49
PDS5AQ29RF7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.12■□□□□ 0.49
PDS5AQ29RF7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms