Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH1Q08174 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH1Q08174 SPTLC1P1-201ENST00000447199 261 ntBASIC14.8□□□□□ -0.04
PCDH1Q08174 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDH1Q08174 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH1Q08174 AC093813.1-201ENST00000605066 256 ntBASIC14.8□□□□□ -0.04
PCDH1Q08174 AL355385.1-201ENST00000606123 409 ntBASIC14.8□□□□□ -0.04
PCDH1Q08174 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH1Q08174 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDH1Q08174 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDH1Q08174 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDH1Q08174 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDH1Q08174 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 PCDHA3-202ENST00000532566 4594 ntBASIC14.8□□□□□ -0.04
PCDH1Q08174 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH1Q08174 SLC7A15P-201ENST00000424028 1363 ntBASIC14.79□□□□□ -0.04
PCDH1Q08174 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 AL138799.1-201ENST00000448213 1675 ntBASIC14.79□□□□□ -0.04
PCDH1Q08174 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.79□□□□□ -0.04
PCDH1Q08174 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
PCDH1Q08174 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDH1Q08174 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDH1Q08174 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 AC009118.2-201ENST00000613275 655 ntBASIC14.79□□□□□ -0.04
PCDH1Q08174 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDH1Q08174 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDH1Q08174 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms