Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AC013726.1-201ENST00000563747 2285 ntBASIC11.83□□□□□ -0.52
HIST1H1AQ02539 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 RBPMS2P1-201ENST00000437762 623 ntBASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AC010327.4-202ENST00000591484 748 ntBASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.82□□□□□ -0.52
HIST1H1AQ02539 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AGAP7P-201ENST00000582299 2062 ntBASIC11.82□□□□□ -0.52
HIST1H1AQ02539 AGAP14-201ENST00000624701 2060 ntBASIC11.82□□□□□ -0.52
HIST1H1AQ02539 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HIST1H1AQ02539 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AL627223.1-201ENST00000416693 442 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 MTND6P24-201ENST00000440466 518 ntBASIC11.81□□□□□ -0.52
HIST1H1AQ02539 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HIST1H1AQ02539 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms