Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 MIR943-201ENST00000401286 94 ntBASIC14.8□□□□□ -0.04
HMGCS1Q01581 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 IGHV3-42-201ENST00000520410 361 ntBASIC14.8□□□□□ -0.04
HMGCS1Q01581 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCS1Q01581 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
HMGCS1Q01581 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC018529.2-202ENST00000611482 3087 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC104457.1-201ENST00000401024 814 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 TIMM17BP1-201ENST00000545713 516 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 DUX4L27-201ENST00000554796 1261 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC027796.2-201ENST00000575326 344 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 AL645728.2-202ENST00000641679 227 ntBASIC14.79□□□□□ -0.04
HMGCS1Q01581 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCS1Q01581 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCS1Q01581 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 MTHFR-210ENST00000641407 2387 ntBASIC14.78□□□□□ -0.04
HMGCS1Q01581 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms