Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-1P78426 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-1P78426 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-1P78426 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 SLED1-202ENST00000512051 380 ntBASIC13.6□□□□□ -0.23
NKX6-1P78426 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-1P78426 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-1P78426 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 AL391069.4-201ENST00000609583 481 ntBASIC13.6□□□□□ -0.23
NKX6-1P78426 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NKX6-1P78426 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 CICP13-201ENST00000422015 2789 ntBASIC13.6□□□□□ -0.23
NKX6-1P78426 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 MIR1908-201ENST00000410394 80 ntBASIC13.59□□□□□ -0.23
NKX6-1P78426 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX6-1P78426 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.59□□□□□ -0.23
NKX6-1P78426 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 SLC25A47P1-201ENST00000531577 414 ntBASIC13.59□□□□□ -0.23
NKX6-1P78426 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX6-1P78426 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 MIR4313-201ENST00000580760 101 ntBASIC13.59□□□□□ -0.23
NKX6-1P78426 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX6-1P78426 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX6-1P78426 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
NKX6-1P78426 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 PDIA3P1-201ENST00000471856 1510 ntBASIC13.59□□□□□ -0.23
NKX6-1P78426 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-1P78426 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-1P78426 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-1P78426 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.58□□□□□ -0.23
NKX6-1P78426 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NKX6-1P78426 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms