Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.45□□□□□ -0.42
LMO4P61968 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LMO4P61968 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 SERPINA13P-202ENST00000478994 924 ntBASIC12.45□□□□□ -0.42
LMO4P61968 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.45□□□□□ -0.42
LMO4P61968 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.45□□□□□ -0.42
LMO4P61968 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 AL358472.3-201ENST00000608147 415 ntBASIC12.45□□□□□ -0.42
LMO4P61968 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
LMO4P61968 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 LILRP1-201ENST00000444199 1370 ntBASIC12.44□□□□□ -0.42
LMO4P61968 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 C18orf15-201ENST00000623680 2534 ntBASIC12.44□□□□□ -0.42
LMO4P61968 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.44□□□□□ -0.42
LMO4P61968 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
LMO4P61968 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO4P61968 NKAIN1P1-201ENST00000435754 582 ntBASIC12.44□□□□□ -0.42
LMO4P61968 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.44□□□□□ -0.42
LMO4P61968 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 HIST2H2BC-201ENST00000498492 580 ntBASIC12.44□□□□□ -0.42
LMO4P61968 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO4P61968 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 AC044849.1-201ENST00000519737 1188 ntBASIC12.44□□□□□ -0.42
LMO4P61968 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO4P61968 ACTG1P17-201ENST00000558391 1119 ntBASIC12.44□□□□□ -0.42
LMO4P61968 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.44□□□□□ -0.42
LMO4P61968 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.44□□□□□ -0.42
LMO4P61968 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 AC002472.3-201ENST00000640124 621 ntBASIC12.44□□□□□ -0.42
LMO4P61968 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
LMO4P61968 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 AP000845.1-201ENST00000581677 2131 ntBASIC12.44□□□□□ -0.42
LMO4P61968 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms