Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CXCR4P61073 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CXCR4P61073 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.99□□□□□ -0.17
CXCR4P61073 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.99□□□□□ -0.17
CXCR4P61073 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.99□□□□□ -0.17
CXCR4P61073 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 AC091812.2-201ENST00000619081 385 ntBASIC13.99□□□□□ -0.17
CXCR4P61073 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 REXO1L4P-201ENST00000605109 1937 ntBASIC13.99□□□□□ -0.17
CXCR4P61073 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 CICP20-201ENST00000443330 2801 ntBASIC13.99□□□□□ -0.17
CXCR4P61073 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCR4P61073 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCR4P61073 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCR4P61073 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CXCR4P61073 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 DGCR9-201ENST00000609630 2415 ntBASIC13.98□□□□□ -0.17
CXCR4P61073 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 HLA-H-201ENST00000383620 1096 ntBASIC13.98□□□□□ -0.17
CXCR4P61073 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 RN7SL589P-201ENST00000481268 310 ntBASIC13.98□□□□□ -0.17
CXCR4P61073 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
CXCR4P61073 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.98□□□□□ -0.17
CXCR4P61073 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.98□□□□□ -0.17
CXCR4P61073 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.98□□□□□ -0.17
CXCR4P61073 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.98□□□□□ -0.17
CXCR4P61073 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CXCR4P61073 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCR4P61073 CICP8-201ENST00000455800 2813 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms