Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 AC018463.1-201ENST00000456674 917 ntBASIC12.79□□□□□ -0.36
RIPPLY3P57055 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 RTN3P1-201ENST00000536295 711 ntBASIC12.79□□□□□ -0.36
RIPPLY3P57055 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 YRDCP1-201ENST00000621419 643 ntBASIC12.79□□□□□ -0.36
RIPPLY3P57055 AL805961.1-203ENST00000641078 1258 ntBASIC12.79□□□□□ -0.36
RIPPLY3P57055 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RIPPLY3P57055 AL355312.1-201ENST00000407115 2176 ntBASIC12.79□□□□□ -0.36
RIPPLY3P57055 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RIPPLY3P57055 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.78□□□□□ -0.36
RIPPLY3P57055 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 MIR6842-201ENST00000612539 65 ntBASIC12.78□□□□□ -0.36
RIPPLY3P57055 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 PRAL-201ENST00000624952 3286 ntBASIC12.78□□□□□ -0.36
RIPPLY3P57055 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.78□□□□□ -0.36
RIPPLY3P57055 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RIPPLY3P57055 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.78□□□□□ -0.36
RIPPLY3P57055 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.77□□□□□ -0.36
RIPPLY3P57055 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
RIPPLY3P57055 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RIPPLY3P57055 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms