Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.29□□□□□ -0.12
PER3P56645 AL583810.1-201ENST00000553344 1045 ntBASIC14.29□□□□□ -0.12
PER3P56645 AC243562.2-201ENST00000561247 970 ntBASIC14.29□□□□□ -0.12
PER3P56645 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 CU634019.7-201ENST00000624153 1185 ntBASIC14.29□□□□□ -0.12
PER3P56645 FP236241.2-201ENST00000624906 1185 ntBASIC14.29□□□□□ -0.12
PER3P56645 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.29□□□□□ -0.12
PER3P56645 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PER3P56645 PDIA3P1-201ENST00000471856 1510 ntBASIC14.29□□□□□ -0.12
PER3P56645 AL592424.1-201ENST00000563624 1536 ntBASIC14.29□□□□□ -0.12
PER3P56645 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
PER3P56645 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.29□□□□□ -0.12
PER3P56645 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.29□□□□□ -0.12
PER3P56645 AL136982.4-201ENST00000437689 1740 ntBASIC14.29□□□□□ -0.12
PER3P56645 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PER3P56645 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PER3P56645 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
PER3P56645 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PER3P56645 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 AL161772.1-201ENST00000610494 4412 ntBASIC14.28□□□□□ -0.12
PER3P56645 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 ANKRD19P-201ENST00000338192 862 ntBASIC14.28□□□□□ -0.12
PER3P56645 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PER3P56645 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PER3P56645 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.28□□□□□ -0.12
PER3P56645 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 FO681548.1-201ENST00000455617 1132 ntBASIC14.28□□□□□ -0.12
PER3P56645 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.28□□□□□ -0.12
PER3P56645 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PER3P56645 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.28□□□□□ -0.12
PER3P56645 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.28□□□□□ -0.12
PER3P56645 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 CICP24-201ENST00000605464 2705 ntBASIC14.28□□□□□ -0.12
PER3P56645 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.28□□□□□ -0.12
PER3P56645 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PER3P56645 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.27□□□□□ -0.12
PER3P56645 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PER3P56645 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.27□□□□□ -0.12
PER3P56645 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.27□□□□□ -0.12
PER3P56645 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.27□□□□□ -0.12
PER3P56645 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.27□□□□□ -0.12
PER3P56645 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PER3P56645 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 CDC14C-201ENST00000428251 1719 ntBASIC14.27□□□□□ -0.12
PER3P56645 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PER3P56645 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PER3P56645 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms