Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK7P50613 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK7P50613 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK7P50613 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK7P50613 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK7P50613 AC104073.2-201ENST00000453737 312 ntBASIC16.83■□□□□ 0.28
CDK7P50613 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 MESTP3-201ENST00000503460 968 ntBASIC16.83■□□□□ 0.28
CDK7P50613 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDK7P50613 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK7P50613 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK7P50613 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK7P50613 AC013355.1-201ENST00000562625 723 ntBASIC16.83■□□□□ 0.28
CDK7P50613 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 AC138466.3-201ENST00000619983 221 ntBASIC16.83■□□□□ 0.28
CDK7P50613 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK7P50613 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK7P50613 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK7P50613 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK7P50613 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK7P50613 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDK7P50613 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 CLUHP2-201ENST00000426660 1303 ntBASIC16.82■□□□□ 0.28
CDK7P50613 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDK7P50613 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 RPL17P11-201ENST00000417593 544 ntBASIC16.82■□□□□ 0.28
CDK7P50613 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 AL596276.2-201ENST00000447525 331 ntBASIC16.82■□□□□ 0.28
CDK7P50613 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 RNMTL1P1-201ENST00000454103 560 ntBASIC16.82■□□□□ 0.28
CDK7P50613 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK7P50613 SAMD11P1-201ENST00000571429 661 ntBASIC16.82■□□□□ 0.28
CDK7P50613 RN7SL163P-201ENST00000583100 276 ntBASIC16.82■□□□□ 0.28
CDK7P50613 AC005324.6-201ENST00000587972 613 ntBASIC16.82■□□□□ 0.28
CDK7P50613 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK7P50613 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK7P50613 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK7P50613 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK7P50613 AC069224.1-201ENST00000566372 1715 ntBASIC16.82■□□□□ 0.28
CDK7P50613 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK7P50613 AC105917.1-201ENST00000506637 2539 ntBASIC16.81■□□□□ 0.28
CDK7P50613 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK7P50613 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK7P50613 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK7P50613 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK7P50613 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK7P50613 MTHFR-217ENST00000641820 1569 ntBASIC16.81■□□□□ 0.28
CDK7P50613 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK7P50613 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms