Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 AC008132.1-202ENST00000342005 1389 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 AP005117.1-202ENST00000581724 1908 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 AC104073.2-201ENST00000453737 312 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 MARK2P5-201ENST00000507649 634 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.79■□□□□ 0.28
CPT1AP50416 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.79■□□□□ 0.28
CPT1AP50416 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 DUX4L46-201ENST00000566845 751 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 AC068587.8-201ENST00000641239 219 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CPT1AP50416 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
CPT1AP50416 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.79■□□□□ 0.28
CPT1AP50416 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPT1AP50416 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.79■□□□□ 0.28
CPT1AP50416 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.79■□□□□ 0.28
CPT1AP50416 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 PRAL-201ENST00000624952 3286 ntBASIC16.78■□□□□ 0.28
CPT1AP50416 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPT1AP50416 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 AC010141.1-201ENST00000411585 623 ntBASIC16.78■□□□□ 0.28
CPT1AP50416 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.78■□□□□ 0.28
CPT1AP50416 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.78■□□□□ 0.28
CPT1AP50416 AL161670.2-201ENST00000557650 1227 ntBASIC16.78■□□□□ 0.28
CPT1AP50416 FGFR3P5-201ENST00000564496 886 ntBASIC16.78■□□□□ 0.28
CPT1AP50416 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 AL139384.1-201ENST00000612143 3047 ntBASIC16.78■□□□□ 0.28
CPT1AP50416 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.78■□□□□ 0.28
CPT1AP50416 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPT1AP50416 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CPT1AP50416 LINC02199-201ENST00000506655 2702 ntBASIC16.77■□□□□ 0.28
CPT1AP50416 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CPT1AP50416 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.77■□□□□ 0.28
CPT1AP50416 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CPT1AP50416 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.77■□□□□ 0.28
CPT1AP50416 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.77■□□□□ 0.28
CPT1AP50416 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPT1AP50416 AC011840.2-201ENST00000563063 1520 ntBASIC16.77■□□□□ 0.28
CPT1AP50416 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.77■□□□□ 0.28
CPT1AP50416 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms