Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.97■□□□□ 0.47
MRE11P49959 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.97■□□□□ 0.47
MRE11P49959 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
MRE11P49959 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.97■□□□□ 0.47
MRE11P49959 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.97■□□□□ 0.47
MRE11P49959 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.97■□□□□ 0.47
MRE11P49959 CRYGEP-201ENST00000412192 528 ntBASIC17.97■□□□□ 0.47
MRE11P49959 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.97■□□□□ 0.47
MRE11P49959 BASP1P1-201ENST00000430708 665 ntBASIC17.97■□□□□ 0.47
MRE11P49959 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.97■□□□□ 0.47
MRE11P49959 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.97■□□□□ 0.47
MRE11P49959 DUX4L27-201ENST00000554796 1261 ntBASIC17.97■□□□□ 0.47
MRE11P49959 AC005412.3-201ENST00000580309 715 ntBASIC17.97■□□□□ 0.47
MRE11P49959 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 AC092902.6-201ENST00000641783 218 ntBASIC17.97■□□□□ 0.47
MRE11P49959 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.97■□□□□ 0.47
MRE11P49959 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
MRE11P49959 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRE11P49959 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.96■□□□□ 0.47
MRE11P49959 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.96■□□□□ 0.47
MRE11P49959 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
MRE11P49959 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
MRE11P49959 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 ARSEP1-201ENST00000420443 635 ntBASIC17.96■□□□□ 0.47
MRE11P49959 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.96■□□□□ 0.47
MRE11P49959 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.96■□□□□ 0.47
MRE11P49959 SLC25A6P2-201ENST00000497974 877 ntBASIC17.96■□□□□ 0.47
MRE11P49959 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.96■□□□□ 0.47
MRE11P49959 AC107918.2-201ENST00000530817 355 ntBASIC17.96■□□□□ 0.47
MRE11P49959 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.96■□□□□ 0.47
MRE11P49959 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 LINC00628-201ENST00000628516 1289 ntBASIC17.96■□□□□ 0.47
MRE11P49959 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.96■□□□□ 0.47
MRE11P49959 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
MRE11P49959 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.96■□□□□ 0.47
MRE11P49959 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 AC105206.1-202ENST00000314927 2368 ntBASIC17.96■□□□□ 0.47
MRE11P49959 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MRE11P49959 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
MRE11P49959 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.96■□□□□ 0.47
MRE11P49959 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRE11P49959 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MRE11P49959 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MRE11P49959 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.96■□□□□ 0.46
MRE11P49959 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MRE11P49959 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.95■□□□□ 0.46
MRE11P49959 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MRE11P49959 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.95■□□□□ 0.46
MRE11P49959 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.95■□□□□ 0.46
MRE11P49959 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.95■□□□□ 0.46
MRE11P49959 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.95■□□□□ 0.46
MRE11P49959 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MRE11P49959 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.95■□□□□ 0.46
MRE11P49959 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.95■□□□□ 0.46
MRE11P49959 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.95■□□□□ 0.46
MRE11P49959 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRE11P49959 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.95■□□□□ 0.46
MRE11P49959 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.95■□□□□ 0.46
MRE11P49959 AC027307.3-201ENST00000594262 1100 ntBASIC17.95■□□□□ 0.46
MRE11P49959 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.95■□□□□ 0.46
MRE11P49959 AC067750.1-201ENST00000608826 6545 ntBASIC17.95■□□□□ 0.46
MRE11P49959 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.95■□□□□ 0.46
MRE11P49959 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms