Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC106886.1-201ENST00000568660 600 ntBASIC17.96■□□□□ 0.46
NEDD4P46934 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.96■□□□□ 0.46
NEDD4P46934 AL512343.1-201ENST00000605837 169 ntBASIC17.96■□□□□ 0.46
NEDD4P46934 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.96■□□□□ 0.46
NEDD4P46934 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.96■□□□□ 0.46
NEDD4P46934 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.96■□□□□ 0.46
NEDD4P46934 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.96■□□□□ 0.46
NEDD4P46934 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.95■□□□□ 0.46
NEDD4P46934 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.95■□□□□ 0.46
NEDD4P46934 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.95■□□□□ 0.46
NEDD4P46934 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NEDD4P46934 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.95■□□□□ 0.46
NEDD4P46934 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.95■□□□□ 0.46
NEDD4P46934 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NEDD4P46934 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.95■□□□□ 0.46
NEDD4P46934 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NEDD4P46934 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.95■□□□□ 0.46
NEDD4P46934 ACA64.2-201ENST00000459014 129 ntBASIC17.95■□□□□ 0.46
NEDD4P46934 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.95■□□□□ 0.46
NEDD4P46934 AC022616.1-201ENST00000518688 554 ntBASIC17.95■□□□□ 0.46
NEDD4P46934 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 KRT90P-201ENST00000549264 1064 ntBASIC17.95■□□□□ 0.46
NEDD4P46934 AC025279.2-201ENST00000569730 653 ntBASIC17.95■□□□□ 0.46
NEDD4P46934 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NEDD4P46934 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEDD4P46934 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NEDD4P46934 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 PDIA3P1-201ENST00000471856 1510 ntBASIC17.94■□□□□ 0.46
NEDD4P46934 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NEDD4P46934 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD4P46934 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD4P46934 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.94■□□□□ 0.46
NEDD4P46934 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.94■□□□□ 0.46
NEDD4P46934 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.94■□□□□ 0.46
NEDD4P46934 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.94■□□□□ 0.46
NEDD4P46934 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.94■□□□□ 0.46
NEDD4P46934 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.94■□□□□ 0.46
NEDD4P46934 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.94■□□□□ 0.46
NEDD4P46934 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
NEDD4P46934 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEDD4P46934 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 AJ011931.1-201ENST00000618749 2492 ntBASIC17.93■□□□□ 0.46
NEDD4P46934 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NEDD4P46934 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.93■□□□□ 0.46
NEDD4P46934 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NEDD4P46934 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms