Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KRT9P35527 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT9P35527 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT9P35527 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT9P35527 AC018529.2-202ENST00000611482 3087 ntBASIC16.81■□□□□ 0.28
KRT9P35527 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT9P35527 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT9P35527 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT9P35527 METTL21AP1-201ENST00000438852 635 ntBASIC16.81■□□□□ 0.28
KRT9P35527 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT9P35527 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 AC051619.7-201ENST00000568314 623 ntBASIC16.81■□□□□ 0.28
KRT9P35527 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 AL138828.2-201ENST00000615812 383 ntBASIC16.81■□□□□ 0.28
KRT9P35527 SPDYE12P-201ENST00000618416 771 ntBASIC16.81■□□□□ 0.28
KRT9P35527 AC073592.8-201ENST00000624126 511 ntBASIC16.81■□□□□ 0.28
KRT9P35527 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
KRT9P35527 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT9P35527 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT9P35527 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT9P35527 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT9P35527 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT9P35527 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
KRT9P35527 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT9P35527 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
KRT9P35527 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 AC074338.1-201ENST00000416825 156 ntBASIC16.8■□□□□ 0.28
KRT9P35527 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KRT9P35527 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT9P35527 AC027369.6-201ENST00000525520 931 ntBASIC16.8■□□□□ 0.28
KRT9P35527 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.8■□□□□ 0.28
KRT9P35527 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT9P35527 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT9P35527 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 AC006538.3-201ENST00000612495 578 ntBASIC16.8■□□□□ 0.28
KRT9P35527 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT9P35527 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT9P35527 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRT9P35527 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT9P35527 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT9P35527 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT9P35527 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT9P35527 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT9P35527 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT9P35527 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT9P35527 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms