Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SLC6A4P31645 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A4P31645 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC6A4P31645 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC6A4P31645 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 AC022532.1-201ENST00000624563 1728 ntBASIC15.65■□□□□ 0.1
SLC6A4P31645 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A4P31645 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.65■□□□□ 0.1
SLC6A4P31645 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC6A4P31645 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC6A4P31645 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC6A4P31645 AC026434.2-201ENST00000506094 1078 ntBASIC15.65■□□□□ 0.1
SLC6A4P31645 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC6A4P31645 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC6A4P31645 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 AL033527.4-201ENST00000641026 673 ntBASIC15.65■□□□□ 0.1
SLC6A4P31645 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SLC6A4P31645 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC6A4P31645 AC092384.3-202ENST00000564646 2873 ntBASIC15.65■□□□□ 0.1
SLC6A4P31645 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC6A4P31645 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A4P31645 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A4P31645 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC6A4P31645 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 POM121L8P-201ENST00000417732 1281 ntBASIC15.64■□□□□ 0.09
SLC6A4P31645 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC6A4P31645 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 POM121L9P-203ENST00000441984 1285 ntBASIC15.64■□□□□ 0.09
SLC6A4P31645 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A4P31645 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC6A4P31645 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC6A4P31645 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC6A4P31645 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC6A4P31645 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC6A4P31645 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 AC006453.4-201ENST00000636949 1252 ntBASIC15.64■□□□□ 0.09
SLC6A4P31645 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC6A4P31645 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC6A4P31645 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC6A4P31645 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
SLC6A4P31645 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
SLC6A4P31645 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC6A4P31645 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms