Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX1P22670 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RFX1P22670 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
RFX1P22670 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX1P22670 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RFX1P22670 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX1P22670 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.7■□□□□ 0.26
RFX1P22670 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.7■□□□□ 0.26
RFX1P22670 MIR4259-201ENST00000584466 101 ntBASIC16.7■□□□□ 0.26
RFX1P22670 CTBP2P3-201ENST00000585629 1255 ntBASIC16.7■□□□□ 0.26
RFX1P22670 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RFX1P22670 MIR6775-201ENST00000617557 69 ntBASIC16.7■□□□□ 0.26
RFX1P22670 AC004461.2-201ENST00000629517 803 ntBASIC16.7■□□□□ 0.26
RFX1P22670 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFX1P22670 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 FAM45BP-202ENST00000592932 1624 ntBASIC16.7■□□□□ 0.26
RFX1P22670 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFX1P22670 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.7■□□□□ 0.26
RFX1P22670 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 AC012508.2-201ENST00000567613 1472 ntBASIC16.69■□□□□ 0.26
RFX1P22670 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 BCYRN1-201ENST00000418539 200 ntBASIC16.69■□□□□ 0.26
RFX1P22670 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 TIMM17BP1-201ENST00000545713 516 ntBASIC16.69■□□□□ 0.26
RFX1P22670 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
RFX1P22670 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.69■□□□□ 0.26
RFX1P22670 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.69■□□□□ 0.26
RFX1P22670 AC023310.3-201ENST00000557027 670 ntBASIC16.69■□□□□ 0.26
RFX1P22670 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.69■□□□□ 0.26
RFX1P22670 AC100756.1-201ENST00000562736 682 ntBASIC16.69■□□□□ 0.26
RFX1P22670 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.69■□□□□ 0.26
RFX1P22670 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.69■□□□□ 0.26
RFX1P22670 AC138749.3-201ENST00000567691 622 ntBASIC16.69■□□□□ 0.26
RFX1P22670 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.69■□□□□ 0.26
RFX1P22670 AC116165.1-201ENST00000611806 668 ntBASIC16.69■□□□□ 0.26
RFX1P22670 AC004790.1-201ENST00000612686 536 ntBASIC16.69■□□□□ 0.26
RFX1P22670 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 AL033527.5-201ENST00000641382 801 ntBASIC16.69■□□□□ 0.26
RFX1P22670 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.69■□□□□ 0.26
RFX1P22670 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms