Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TNRC18P3-201ENST00000441896 2691 ntBASIC20.64■□□□□ 0.89
ATF3P18847 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 AC012313.1-201ENST00000593393 3059 ntBASIC20.64■□□□□ 0.89
ATF3P18847 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.63■□□□□ 0.89
ATF3P18847 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 AL357563.1-201ENST00000404728 395 ntBASIC20.63■□□□□ 0.89
ATF3P18847 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.63■□□□□ 0.89
ATF3P18847 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC20.63■□□□□ 0.89
ATF3P18847 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATF3P18847 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 AC011247.3-201ENST00000603297 438 ntBASIC20.63■□□□□ 0.89
ATF3P18847 AC006158.1-201ENST00000610661 249 ntBASIC20.63■□□□□ 0.89
ATF3P18847 AC027601.3-201ENST00000622907 509 ntBASIC20.63■□□□□ 0.89
ATF3P18847 AC138466.5-201ENST00000624002 808 ntBASIC20.63■□□□□ 0.89
ATF3P18847 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.63■□□□□ 0.89
ATF3P18847 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATF3P18847 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
ATF3P18847 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATF3P18847 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.63■□□□□ 0.89
ATF3P18847 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC20.62■□□□□ 0.89
ATF3P18847 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.62■□□□□ 0.89
ATF3P18847 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.62■□□□□ 0.89
ATF3P18847 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.62■□□□□ 0.89
ATF3P18847 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATF3P18847 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 TSPY25P-201ENST00000429463 745 ntBASIC20.62■□□□□ 0.89
ATF3P18847 AL354861.1-201ENST00000445213 355 ntBASIC20.62■□□□□ 0.89
ATF3P18847 FTH1P22-201ENST00000456305 520 ntBASIC20.62■□□□□ 0.89
ATF3P18847 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.62■□□□□ 0.89
ATF3P18847 ORAOV1P1-201ENST00000503108 395 ntBASIC20.62■□□□□ 0.89
ATF3P18847 AC084752.1-201ENST00000509766 622 ntBASIC20.62■□□□□ 0.89
ATF3P18847 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.62■□□□□ 0.89
ATF3P18847 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.62■□□□□ 0.89
ATF3P18847 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.62■□□□□ 0.89
ATF3P18847 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.62■□□□□ 0.89
ATF3P18847 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.62■□□□□ 0.89
ATF3P18847 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.62■□□□□ 0.89
ATF3P18847 AC244250.3-201ENST00000620749 366 ntBASIC20.62■□□□□ 0.89
ATF3P18847 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.62■□□□□ 0.89
ATF3P18847 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.62■□□□□ 0.89
ATF3P18847 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATF3P18847 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ATF3P18847 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.61■□□□□ 0.89
ATF3P18847 IL9RP3-201ENST00000442856 1674 ntBASIC20.61■□□□□ 0.89
ATF3P18847 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
ATF3P18847 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.61■□□□□ 0.89
ATF3P18847 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATF3P18847 CYP4F23P-201ENST00000593402 1579 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms