Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BMP3P12645 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BMP3P12645 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BMP3P12645 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BMP3P12645 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BMP3P12645 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BMP3P12645 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.56■□□□□ 0.4
BMP3P12645 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BMP3P12645 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
BMP3P12645 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.56■□□□□ 0.4
BMP3P12645 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.55■□□□□ 0.4
BMP3P12645 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.55■□□□□ 0.4
BMP3P12645 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.55■□□□□ 0.4
BMP3P12645 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.55■□□□□ 0.4
BMP3P12645 AC006033.1-201ENST00000440505 426 ntBASIC17.55■□□□□ 0.4
BMP3P12645 AC104306.2-201ENST00000451877 341 ntBASIC17.55■□□□□ 0.4
BMP3P12645 AC099548.2-209ENST00000480264 625 ntBASIC17.55■□□□□ 0.4
BMP3P12645 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.55■□□□□ 0.4
BMP3P12645 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.55■□□□□ 0.4
BMP3P12645 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 AC244093.1-201ENST00000610837 814 ntBASIC17.55■□□□□ 0.4
BMP3P12645 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 ZACNP1-201ENST00000612259 710 ntBASIC17.55■□□□□ 0.4
BMP3P12645 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BMP3P12645 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
BMP3P12645 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.55■□□□□ 0.4
BMP3P12645 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BMP3P12645 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.54■□□□□ 0.4
BMP3P12645 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 AC023024.2-201ENST00000623561 1993 ntBASIC17.54■□□□□ 0.4
BMP3P12645 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 AC079178.1-201ENST00000420915 656 ntBASIC17.54■□□□□ 0.4
BMP3P12645 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.54■□□□□ 0.4
BMP3P12645 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.54■□□□□ 0.4
BMP3P12645 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.54■□□□□ 0.4
BMP3P12645 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.54■□□□□ 0.4
BMP3P12645 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
BMP3P12645 AC104982.3-201ENST00000581995 514 ntBASIC17.54■□□□□ 0.4
BMP3P12645 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.54■□□□□ 0.4
BMP3P12645 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
BMP3P12645 AL096828.3-201ENST00000615354 462 ntBASIC17.54■□□□□ 0.4
BMP3P12645 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 KRT8P4-201ENST00000509735 1454 ntBASIC17.54■□□□□ 0.4
BMP3P12645 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.54■□□□□ 0.4
BMP3P12645 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BMP3P12645 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BMP3P12645 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.53■□□□□ 0.4
BMP3P12645 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.53■□□□□ 0.4
BMP3P12645 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BMP3P12645 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 AC126365.1-201ENST00000578585 1514 ntBASIC17.53■□□□□ 0.4
BMP3P12645 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 AP000845.1-201ENST00000581677 2131 ntBASIC17.53■□□□□ 0.4
BMP3P12645 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.53■□□□□ 0.4
BMP3P12645 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.53■□□□□ 0.4
BMP3P12645 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BMP3P12645 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BMP3P12645 MIR1247-201ENST00000408206 136 ntBASIC17.53■□□□□ 0.4
BMP3P12645 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.53■□□□□ 0.4
BMP3P12645 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms