Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CD28P10747 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CD28P10747 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CD28P10747 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 AC007950.2-201ENST00000615045 2347 ntBASIC12□□□□□ -0.49
CD28P10747 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12□□□□□ -0.49
CD28P10747 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CD28P10747 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CD28P10747 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 AC068418.2-201ENST00000577309 3703 ntBASIC12□□□□□ -0.49
CD28P10747 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CD28P10747 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 RNU1-114P-201ENST00000365297 166 ntBASIC12□□□□□ -0.49
CD28P10747 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12□□□□□ -0.49
CD28P10747 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12□□□□□ -0.49
CD28P10747 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12□□□□□ -0.49
CD28P10747 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12□□□□□ -0.49
CD28P10747 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12□□□□□ -0.49
CD28P10747 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12□□□□□ -0.49
CD28P10747 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 AC243960.2-201ENST00000600996 747 ntBASIC12□□□□□ -0.49
CD28P10747 AC091271.1-201ENST00000611877 1162 ntBASIC12□□□□□ -0.49
CD28P10747 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12□□□□□ -0.49
CD28P10747 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12□□□□□ -0.49
CD28P10747 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CD28P10747 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD28P10747 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12□□□□□ -0.49
CD28P10747 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12□□□□□ -0.49
CD28P10747 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
CD28P10747 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
CD28P10747 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.99□□□□□ -0.49
CD28P10747 AL590640.2-201ENST00000457038 527 ntBASIC11.99□□□□□ -0.49
CD28P10747 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.99□□□□□ -0.49
CD28P10747 AC099548.2-209ENST00000480264 625 ntBASIC11.99□□□□□ -0.49
CD28P10747 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.99□□□□□ -0.49
CD28P10747 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.99□□□□□ -0.49
CD28P10747 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.99□□□□□ -0.49
CD28P10747 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.99□□□□□ -0.49
CD28P10747 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.99□□□□□ -0.49
CD28P10747 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD28P10747 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.99□□□□□ -0.49
CD28P10747 AL133338.1-201ENST00000565695 1517 ntBASIC11.99□□□□□ -0.49
CD28P10747 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms