Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.1■□□□□ 0.17
RARAP10276 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.1■□□□□ 0.17
RARAP10276 AC093214.1-201ENST00000511688 1107 ntBASIC16.1■□□□□ 0.17
RARAP10276 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.1■□□□□ 0.17
RARAP10276 AL645728.2-202ENST00000641679 227 ntBASIC16.1■□□□□ 0.17
RARAP10276 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.1■□□□□ 0.17
RARAP10276 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
RARAP10276 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RARAP10276 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.1■□□□□ 0.17
RARAP10276 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RARAP10276 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.1■□□□□ 0.17
RARAP10276 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RARAP10276 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 BASP1P1-201ENST00000430708 665 ntBASIC16.09■□□□□ 0.17
RARAP10276 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.09■□□□□ 0.17
RARAP10276 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.09■□□□□ 0.17
RARAP10276 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RARAP10276 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 CLK3P2-201ENST00000427566 1453 ntBASIC16.09■□□□□ 0.17
RARAP10276 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.09■□□□□ 0.17
RARAP10276 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RARAP10276 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.08■□□□□ 0.17
RARAP10276 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RARAP10276 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RARAP10276 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.08■□□□□ 0.16
RARAP10276 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 AC104457.1-201ENST00000401024 814 ntBASIC16.08■□□□□ 0.16
RARAP10276 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RARAP10276 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.08■□□□□ 0.16
RARAP10276 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 AC104794.3-201ENST00000566840 1248 ntBASIC16.08■□□□□ 0.16
RARAP10276 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.08■□□□□ 0.16
RARAP10276 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms