Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMIGD3P0DMS9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMIGD3P0DMS9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMIGD3P0DMS9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AL121723.1-201ENST00000445194 1519 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 MIR658-201ENST00000385210 100 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 KRT43P-201ENST00000434019 910 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AC007274.1-201ENST00000439805 662 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AC112693.3-201ENST00000624819 1983 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 AC009090.5-201ENST00000624886 2285 ntBASIC13.92□□□□□ -0.18
TMIGD3P0DMS9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AC007686.3-201ENST00000619017 3487 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 C1QBPP1-201ENST00000400117 770 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 MIR1909-201ENST00000411312 80 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 VDAC1P7-201ENST00000462417 847 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 ENPP7P5-201ENST00000541031 1031 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AC120045.2-201ENST00000567334 178 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AL512343.1-201ENST00000605837 169 ntBASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMIGD3P0DMS9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms