Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.33■□□□□ 0.2
FAM228BP0C875 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.33■□□□□ 0.2
FAM228BP0C875 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AC114501.2-201ENST00000439631 535 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AC004449.1-201ENST00000564240 433 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AL391069.4-201ENST00000609583 481 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 AL590560.3-201ENST00000623350 461 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 AL158212.4-201ENST00000624062 1286 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 AC100757.3-201ENST00000622361 1406 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.33■□□□□ 0.2
FAM228BP0C875 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.33■□□□□ 0.2
FAM228BP0C875 PCDHA3-202ENST00000532566 4594 ntBASIC16.33■□□□□ 0.2
FAM228BP0C875 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FAM228BP0C875 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FAM228BP0C875 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.32■□□□□ 0.2
FAM228BP0C875 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.32■□□□□ 0.2
FAM228BP0C875 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FAM228BP0C875 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.32■□□□□ 0.2
FAM228BP0C875 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.32■□□□□ 0.2
FAM228BP0C875 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.32■□□□□ 0.2
FAM228BP0C875 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 GAPDHP40-201ENST00000505218 1006 ntBASIC16.32■□□□□ 0.2
FAM228BP0C875 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.32■□□□□ 0.2
FAM228BP0C875 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.32■□□□□ 0.2
FAM228BP0C875 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.32■□□□□ 0.2
FAM228BP0C875 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
FAM228BP0C875 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.32■□□□□ 0.2
FAM228BP0C875 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FAM228BP0C875 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FAM228BP0C875 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FAM228BP0C875 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FAM228BP0C875 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.31■□□□□ 0.2
FAM228BP0C875 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.31■□□□□ 0.2
FAM228BP0C875 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FAM228BP0C875 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FAM228BP0C875 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.31■□□□□ 0.2
FAM228BP0C875 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms