Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 RPL13P2-201ENST00000440687 659 ntBASIC16.66■□□□□ 0.26
CCDC172P0C7W6 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.66■□□□□ 0.26
CCDC172P0C7W6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 AC010327.5-201ENST00000586923 3061 ntBASIC16.66■□□□□ 0.26
CCDC172P0C7W6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC172P0C7W6 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC027612.4-201ENST00000605371 583 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AL596442.2-201ENST00000610240 980 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 TEX28P1-201ENST00000613479 1221 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 TEX28P2-201ENST00000617764 1221 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC073592.8-201ENST00000624126 511 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 FGD5P1-202ENST00000614866 2498 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC012508.2-201ENST00000567613 1472 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC007292.2-201ENST00000593524 1812 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 CICP23-201ENST00000605013 2741 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 TUBB3P1-201ENST00000405796 1332 ntBASIC16.65■□□□□ 0.26
CCDC172P0C7W6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC172P0C7W6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC172P0C7W6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC172P0C7W6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 TSEN15P1-201ENST00000423257 515 ntBASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AC069120.2-201ENST00000524091 540 ntBASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AC051619.7-201ENST00000568314 623 ntBASIC16.64■□□□□ 0.25
CCDC172P0C7W6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC172P0C7W6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms