Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AC020907.1-201ENST00000616460 1350 ntBASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40ALP0C0E4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AC073347.1-201ENST00000421633 2643 ntBASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 RNU1-114P-201ENST00000365297 166 ntBASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 MIR6787-201ENST00000616675 61 ntBASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AC009542.2-202ENST00000619004 1067 ntBASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AC006453.4-201ENST00000636949 1252 ntBASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40ALP0C0E4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40ALP0C0E4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms