Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TPM1P09493 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM1P09493 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.96■□□□□ 0.31
TPM1P09493 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM1P09493 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.96■□□□□ 0.31
TPM1P09493 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.96■□□□□ 0.31
TPM1P09493 AC106730.1-201ENST00000566722 1090 ntBASIC16.96■□□□□ 0.31
TPM1P09493 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
TPM1P09493 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.96■□□□□ 0.31
TPM1P09493 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM1P09493 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM1P09493 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.96■□□□□ 0.31
TPM1P09493 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM1P09493 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM1P09493 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM1P09493 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPM1P09493 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.96■□□□□ 0.3
TPM1P09493 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TPM1P09493 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPM1P09493 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.96■□□□□ 0.3
TPM1P09493 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 AC010327.5-201ENST00000586923 3061 ntBASIC16.95■□□□□ 0.3
TPM1P09493 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 AC131212.3-201ENST00000624087 4219 ntBASIC16.95■□□□□ 0.3
TPM1P09493 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TPM1P09493 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 FO393414.2-201ENST00000405153 598 ntBASIC16.95■□□□□ 0.3
TPM1P09493 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM1P09493 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM1P09493 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM1P09493 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 AC079140.1-201ENST00000508039 487 ntBASIC16.95■□□□□ 0.3
TPM1P09493 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 RARRES2P9-201ENST00000565168 469 ntBASIC16.95■□□□□ 0.3
TPM1P09493 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM1P09493 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TPM1P09493 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
TPM1P09493 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM1P09493 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TPM1P09493 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TPM1P09493 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM1P09493 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.94■□□□□ 0.3
TPM1P09493 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 MED15P5-201ENST00000423150 992 ntBASIC16.94■□□□□ 0.3
TPM1P09493 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM1P09493 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM1P09493 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM1P09493 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM1P09493 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM1P09493 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.94■□□□□ 0.3
TPM1P09493 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.94■□□□□ 0.3
TPM1P09493 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.94■□□□□ 0.3
TPM1P09493 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPM1P09493 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms