Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PMS2P4-201ENST00000412466 1052 ntBASIC11.94□□□□□ -0.5
CXCL1P09341 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CXCL1P09341 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.94□□□□□ -0.5
CXCL1P09341 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.94□□□□□ -0.5
CXCL1P09341 RPS15P9-201ENST00000494093 319 ntBASIC11.94□□□□□ -0.5
CXCL1P09341 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.94□□□□□ -0.5
CXCL1P09341 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.94□□□□□ -0.5
CXCL1P09341 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.94□□□□□ -0.5
CXCL1P09341 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.94□□□□□ -0.5
CXCL1P09341 AC138894.3-201ENST00000603787 634 ntBASIC11.94□□□□□ -0.5
CXCL1P09341 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.94□□□□□ -0.5
CXCL1P09341 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.94□□□□□ -0.5
CXCL1P09341 AC106818.1-201ENST00000623223 3242 ntBASIC11.94□□□□□ -0.5
CXCL1P09341 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CXCL1P09341 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CXCL1P09341 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.94□□□□□ -0.5
CXCL1P09341 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.94□□□□□ -0.5
CXCL1P09341 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CXCL1P09341 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.94□□□□□ -0.5
CXCL1P09341 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.94□□□□□ -0.5
CXCL1P09341 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CXCL1P09341 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CXCL1P09341 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 KRT8P24-201ENST00000560290 1559 ntBASIC11.93□□□□□ -0.5
CXCL1P09341 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.93□□□□□ -0.5
CXCL1P09341 DMBT1P1-203ENST00000636837 4628 ntBASIC11.93□□□□□ -0.5
CXCL1P09341 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.93□□□□□ -0.5
CXCL1P09341 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.93□□□□□ -0.5
CXCL1P09341 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 RNU1-129P-201ENST00000384064 167 ntBASIC11.93□□□□□ -0.5
CXCL1P09341 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 FGFR3P6-201ENST00000457012 610 ntBASIC11.93□□□□□ -0.5
CXCL1P09341 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CXCL1P09341 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CXCL1P09341 U1.21-201ENST00000580816 167 ntBASIC11.93□□□□□ -0.5
CXCL1P09341 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.93□□□□□ -0.5
CXCL1P09341 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CXCL1P09341 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 AL031055.1-201ENST00000606362 631 ntBASIC11.93□□□□□ -0.5
CXCL1P09341 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
CXCL1P09341 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.93□□□□□ -0.5
CXCL1P09341 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CXCL1P09341 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CXCL1P09341 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CXCL1P09341 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.92□□□□□ -0.5
CXCL1P09341 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 BNIP3P1-202ENST00000550043 1585 ntBASIC11.92□□□□□ -0.5
CXCL1P09341 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.92□□□□□ -0.5
CXCL1P09341 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 AC016397.2-201ENST00000624848 1985 ntBASIC11.92□□□□□ -0.5
CXCL1P09341 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.92□□□□□ -0.5
CXCL1P09341 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CXCL1P09341 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.92□□□□□ -0.5
CXCL1P09341 AC018892.3-201ENST00000623986 2499 ntBASIC11.92□□□□□ -0.5
CXCL1P09341 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms