Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SFTPBP07988 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SFTPBP07988 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC055876.3-201ENST00000431496 288 ntBASIC13.41□□□□□ -0.26
SFTPBP07988 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.41□□□□□ -0.26
SFTPBP07988 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.41□□□□□ -0.26
SFTPBP07988 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC069120.2-201ENST00000524091 540 ntBASIC13.41□□□□□ -0.26
SFTPBP07988 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.41□□□□□ -0.26
SFTPBP07988 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC140878.1-201ENST00000565277 250 ntBASIC13.41□□□□□ -0.26
SFTPBP07988 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.41□□□□□ -0.26
SFTPBP07988 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.41□□□□□ -0.26
SFTPBP07988 AC138649.4-201ENST00000612222 287 ntBASIC13.41□□□□□ -0.26
SFTPBP07988 AL390754.1-201ENST00000619088 582 ntBASIC13.41□□□□□ -0.26
SFTPBP07988 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.41□□□□□ -0.26
SFTPBP07988 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SFTPBP07988 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SFTPBP07988 AL607033.1-201ENST00000623900 1599 ntBASIC13.41□□□□□ -0.26
SFTPBP07988 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.4□□□□□ -0.26
SFTPBP07988 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 LINC01101-201ENST00000622953 1884 ntBASIC13.4□□□□□ -0.26
SFTPBP07988 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SFTPBP07988 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.4□□□□□ -0.26
SFTPBP07988 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.4□□□□□ -0.26
SFTPBP07988 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.4□□□□□ -0.26
SFTPBP07988 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.4□□□□□ -0.26
SFTPBP07988 SPCS2P1-201ENST00000561636 679 ntBASIC13.4□□□□□ -0.26
SFTPBP07988 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.4□□□□□ -0.26
SFTPBP07988 AC105021.1-202ENST00000570572 669 ntBASIC13.4□□□□□ -0.26
SFTPBP07988 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.4□□□□□ -0.26
SFTPBP07988 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.4□□□□□ -0.26
SFTPBP07988 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.4□□□□□ -0.26
SFTPBP07988 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SFTPBP07988 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 KRT8P44-201ENST00000441609 1350 ntBASIC13.4□□□□□ -0.26
SFTPBP07988 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SFTPBP07988 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms