Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN1P07384 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CAPN1P07384 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN1P07384 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN1P07384 AC140912.1-201ENST00000577171 1054 ntBASIC15.16■□□□□ 0.02
CAPN1P07384 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 CHCHD2P3-201ENST00000603038 451 ntBASIC15.16■□□□□ 0.02
CAPN1P07384 MIR6069-201ENST00000620069 79 ntBASIC15.16■□□□□ 0.02
CAPN1P07384 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN1P07384 AL109936.8-201ENST00000641772 604 ntBASIC15.16■□□□□ 0.02
CAPN1P07384 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CAPN1P07384 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN1P07384 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CAPN1P07384 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CAPN1P07384 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN1P07384 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.15■□□□□ 0.02
CAPN1P07384 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN1P07384 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
CAPN1P07384 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN1P07384 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN1P07384 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.15■□□□□ 0.02
CAPN1P07384 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.15■□□□□ 0.02
CAPN1P07384 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN1P07384 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN1P07384 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.15■□□□□ 0.02
CAPN1P07384 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CAPN1P07384 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CAPN1P07384 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.15■□□□□ 0.02
CAPN1P07384 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CAPN1P07384 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 AL391825.1-201ENST00000457671 1364 ntBASIC15.14■□□□□ 0.01
CAPN1P07384 CICP11-201ENST00000434745 2827 ntBASIC15.14■□□□□ 0.01
CAPN1P07384 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPN1P07384 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 CICP23-201ENST00000605013 2741 ntBASIC15.14■□□□□ 0.01
CAPN1P07384 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CAPN1P07384 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 DGCR5-201ENST00000399539 862 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms