Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.03■□□□□ 0.16
RB1P06400 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 AL360270.3-201ENST00000609118 1348 ntBASIC16.03■□□□□ 0.16
RB1P06400 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 REXO1L5P-201ENST00000622260 2098 ntBASIC16.03■□□□□ 0.16
RB1P06400 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 FGFR3P1-201ENST00000449999 601 ntBASIC16.03■□□□□ 0.16
RB1P06400 RN7SL818P-201ENST00000485099 259 ntBASIC16.03■□□□□ 0.16
RB1P06400 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.03■□□□□ 0.16
RB1P06400 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RB1P06400 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.03■□□□□ 0.16
RB1P06400 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.03■□□□□ 0.16
RB1P06400 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.03■□□□□ 0.16
RB1P06400 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.03■□□□□ 0.16
RB1P06400 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.03■□□□□ 0.16
RB1P06400 RN7SL725P-201ENST00000606439 259 ntBASIC16.03■□□□□ 0.16
RB1P06400 AC138696.2-201ENST00000607376 223 ntBASIC16.03■□□□□ 0.16
RB1P06400 RN7SL736P-201ENST00000613111 269 ntBASIC16.03■□□□□ 0.16
RB1P06400 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.03■□□□□ 0.16
RB1P06400 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RB1P06400 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
RB1P06400 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.03■□□□□ 0.16
RB1P06400 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
RB1P06400 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RB1P06400 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.02■□□□□ 0.16
RB1P06400 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.02■□□□□ 0.16
RB1P06400 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RB1P06400 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.02■□□□□ 0.16
RB1P06400 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.02■□□□□ 0.16
RB1P06400 RN7SL181P-201ENST00000462921 277 ntBASIC16.02■□□□□ 0.16
RB1P06400 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.02■□□□□ 0.16
RB1P06400 NPM1P43-201ENST00000558669 786 ntBASIC16.02■□□□□ 0.16
RB1P06400 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.02■□□□□ 0.16
RB1P06400 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RB1P06400 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.02■□□□□ 0.16
RB1P06400 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.02■□□□□ 0.16
RB1P06400 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.02■□□□□ 0.16
RB1P06400 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RB1P06400 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.02■□□□□ 0.15
RB1P06400 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
RB1P06400 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.02■□□□□ 0.15
RB1P06400 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
RB1P06400 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.02■□□□□ 0.15
RB1P06400 E2F3P2-201ENST00000447755 1422 ntBASIC16.02■□□□□ 0.15
RB1P06400 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RB1P06400 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.02■□□□□ 0.15
RB1P06400 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.02■□□□□ 0.15
RB1P06400 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
RB1P06400 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.01■□□□□ 0.15
RB1P06400 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RB1P06400 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
RB1P06400 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.01■□□□□ 0.15
RB1P06400 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms