Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CD74P04233 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.91□□□□□ -0.34
CD74P04233 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD74P04233 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CD74P04233 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 HIST3H2BA-201ENST00000436555 524 ntBASIC12.9□□□□□ -0.34
CD74P04233 AC022447.6-201ENST00000515522 438 ntBASIC12.9□□□□□ -0.34
CD74P04233 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 AL135744.1-201ENST00000565098 629 ntBASIC12.9□□□□□ -0.34
CD74P04233 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 AP000842.3-202ENST00000569238 1080 ntBASIC12.9□□□□□ -0.34
CD74P04233 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.9□□□□□ -0.34
CD74P04233 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CD74P04233 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CD74P04233 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 AL354702.1-201ENST00000442006 1960 ntBASIC12.9□□□□□ -0.34
CD74P04233 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CD74P04233 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CD74P04233 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD74P04233 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CD74P04233 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.9□□□□□ -0.35
CD74P04233 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.9□□□□□ -0.35
CD74P04233 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 KRT8P22-201ENST00000562317 1415 ntBASIC12.89□□□□□ -0.35
CD74P04233 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.89□□□□□ -0.35
CD74P04233 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.89□□□□□ -0.35
CD74P04233 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CD74P04233 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD74P04233 TARDBPP1-201ENST00000442013 1203 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms