Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBC1P01850 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBC1P01850 ACTBP8-201ENST00000403258 1108 ntBASIC15.33■□□□□ 0.04
TRBC1P01850 HLA-K-203ENST00000430151 1046 ntBASIC15.33■□□□□ 0.04
TRBC1P01850 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBC1P01850 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRBC1P01850 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBC1P01850 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.33■□□□□ 0.04
TRBC1P01850 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRBC1P01850 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRBC1P01850 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBC1P01850 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 AL157414.3-201ENST00000624276 1954 ntBASIC15.33■□□□□ 0.04
TRBC1P01850 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRBC1P01850 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRBC1P01850 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBC1P01850 REXO1L5P-201ENST00000622260 2098 ntBASIC15.32■□□□□ 0.04
TRBC1P01850 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TRBC1P01850 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.32■□□□□ 0.04
TRBC1P01850 AP001889.1-201ENST00000525414 633 ntBASIC15.32■□□□□ 0.04
TRBC1P01850 SLC25A47P1-201ENST00000531577 414 ntBASIC15.32■□□□□ 0.04
TRBC1P01850 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBC1P01850 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBC1P01850 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBC1P01850 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.32■□□□□ 0.04
TRBC1P01850 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 KRT8P35-201ENST00000483942 1338 ntBASIC15.32■□□□□ 0.04
TRBC1P01850 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 AC144831.1-201ENST00000573312 2656 ntBASIC15.32■□□□□ 0.04
TRBC1P01850 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 DBET-201ENST00000630918 3363 ntBASIC15.32■□□□□ 0.04
TRBC1P01850 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBC1P01850 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms