Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 HIST2H2BA-201ENST00000412169 381 ntBASIC17.17■□□□□ 0.34
ALDH1A1P00352 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 TMCO5B-205ENST00000530020 894 ntBASIC17.17■□□□□ 0.34
ALDH1A1P00352 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 NIFKP4-201ENST00000567275 1192 ntBASIC17.17■□□□□ 0.34
ALDH1A1P00352 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 AC107464.3-201ENST00000609172 737 ntBASIC17.17■□□□□ 0.34
ALDH1A1P00352 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ALDH1A1P00352 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ALDH1A1P00352 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC015909.3-201ENST00000572855 1794 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 RN7SKP230-201ENST00000365642 335 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 RPSAP15-201ENST00000448168 861 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 ALG3P1-201ENST00000508806 1114 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 DNM1P51-201ENST00000558149 522 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 RN7SL470P-201ENST00000583069 259 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC007326.1-201ENST00000604539 458 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC009560.1-201ENST00000620208 434 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC025262.2-201ENST00000623975 1056 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AP001184.1-201ENST00000637936 376 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC144522.1-201ENST00000625111 1658 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ALDH1A1P00352 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 AC069224.1-201ENST00000566372 1715 ntBASIC17.16■□□□□ 0.34
ALDH1A1P00352 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.16■□□□□ 0.34
ALDH1A1P00352 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.15■□□□□ 0.34
ALDH1A1P00352 AL157407.1-201ENST00000435784 904 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 AL035414.1-201ENST00000451327 857 ntBASIC17.15■□□□□ 0.34
ALDH1A1P00352 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms