Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.76■□□□□ 0.11
TOP3BO95985 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.76■□□□□ 0.11
TOP3BO95985 AL355994.2-201ENST00000447882 704 ntBASIC15.76■□□□□ 0.11
TOP3BO95985 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.76■□□□□ 0.11
TOP3BO95985 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.76■□□□□ 0.11
TOP3BO95985 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TOP3BO95985 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.76■□□□□ 0.11
TOP3BO95985 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.76■□□□□ 0.11
TOP3BO95985 BTNL10-201ENST00000595971 695 ntBASIC15.76■□□□□ 0.11
TOP3BO95985 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.76■□□□□ 0.11
TOP3BO95985 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.76■□□□□ 0.11
TOP3BO95985 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.76■□□□□ 0.11
TOP3BO95985 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TOP3BO95985 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TOP3BO95985 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TOP3BO95985 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOP3BO95985 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOP3BO95985 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOP3BO95985 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOP3BO95985 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOP3BO95985 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
TOP3BO95985 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOP3BO95985 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
TOP3BO95985 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TOP3BO95985 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.75■□□□□ 0.11
TOP3BO95985 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 AC010319.3-201ENST00000597028 470 ntBASIC15.75■□□□□ 0.11
TOP3BO95985 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.75■□□□□ 0.11
TOP3BO95985 MIR8072-201ENST00000614241 80 ntBASIC15.75■□□□□ 0.11
TOP3BO95985 RPSAP52-203ENST00000622976 1023 ntBASIC15.75■□□□□ 0.11
TOP3BO95985 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TOP3BO95985 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.75■□□□□ 0.11
TOP3BO95985 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TOP3BO95985 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOP3BO95985 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.74■□□□□ 0.11
TOP3BO95985 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.74■□□□□ 0.11
TOP3BO95985 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TOP3BO95985 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.74■□□□□ 0.11
TOP3BO95985 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.74■□□□□ 0.11
TOP3BO95985 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 AC139749.1-202ENST00000617529 3139 ntBASIC15.74■□□□□ 0.11
TOP3BO95985 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TOP3BO95985 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOP3BO95985 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TOP3BO95985 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms