Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 AC092658.1-201ENST00000505836 891 ntBASIC13.68□□□□□ -0.22
CNOT4O95628 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.68□□□□□ -0.22
CNOT4O95628 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.68□□□□□ -0.22
CNOT4O95628 AC104640.1-201ENST00000562617 2109 ntBASIC13.68□□□□□ -0.22
CNOT4O95628 AC009486.1-201ENST00000569860 813 ntBASIC13.68□□□□□ -0.22
CNOT4O95628 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.68□□□□□ -0.22
CNOT4O95628 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.68□□□□□ -0.22
CNOT4O95628 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.68□□□□□ -0.22
CNOT4O95628 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CNOT4O95628 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.68□□□□□ -0.22
CNOT4O95628 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 DBET-201ENST00000630918 3363 ntBASIC13.68□□□□□ -0.22
CNOT4O95628 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNOT4O95628 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CNOT4O95628 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.67□□□□□ -0.22
CNOT4O95628 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 AC084364.1-201ENST00000551967 1556 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CNOT4O95628 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.67□□□□□ -0.22
CNOT4O95628 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CNOT4O95628 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CNOT4O95628 ACTG1P3-201ENST00000431775 1114 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 AC234783.1-201ENST00000441761 496 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.67□□□□□ -0.22
CNOT4O95628 VDAC1P7-201ENST00000462417 847 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.67□□□□□ -0.22
CNOT4O95628 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.67□□□□□ -0.22
CNOT4O95628 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.67□□□□□ -0.22
CNOT4O95628 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.67□□□□□ -0.22
CNOT4O95628 AL359711.2-201ENST00000563105 872 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 AL512343.1-201ENST00000605837 169 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.67□□□□□ -0.22
CNOT4O95628 CU634019.7-201ENST00000624153 1185 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 FP236241.2-201ENST00000624906 1185 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 PRAL-201ENST00000624952 3286 ntBASIC13.67□□□□□ -0.22
CNOT4O95628 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.67□□□□□ -0.22
CNOT4O95628 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CNOT4O95628 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNOT4O95628 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.67□□□□□ -0.22
CNOT4O95628 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.66□□□□□ -0.22
CNOT4O95628 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.66□□□□□ -0.22
CNOT4O95628 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CNOT4O95628 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNOT4O95628 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNOT4O95628 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.66□□□□□ -0.22
CNOT4O95628 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNOT4O95628 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.66□□□□□ -0.22
CNOT4O95628 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNOT4O95628 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNOT4O95628 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.66□□□□□ -0.22
CNOT4O95628 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms