Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CSPG5O95196 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CSPG5O95196 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CSPG5O95196 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CSPG5O95196 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CSPG5O95196 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 LRRC59-203ENST00000576448 1531 ntBASIC16.47■□□□□ 0.23
CSPG5O95196 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CSPG5O95196 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 FXNP2-201ENST00000411625 547 ntBASIC16.47■□□□□ 0.23
CSPG5O95196 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.47■□□□□ 0.23
CSPG5O95196 AC004898.1-201ENST00000451057 766 ntBASIC16.47■□□□□ 0.23
CSPG5O95196 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.47■□□□□ 0.23
CSPG5O95196 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.47■□□□□ 0.23
CSPG5O95196 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CSPG5O95196 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.47■□□□□ 0.23
CSPG5O95196 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.47■□□□□ 0.23
CSPG5O95196 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.47■□□□□ 0.23
CSPG5O95196 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.47■□□□□ 0.23
CSPG5O95196 AC015967.2-201ENST00000624092 234 ntBASIC16.47■□□□□ 0.23
CSPG5O95196 AC006435.4-201ENST00000625037 234 ntBASIC16.47■□□□□ 0.23
CSPG5O95196 AL356737.1-201ENST00000634391 234 ntBASIC16.47■□□□□ 0.23
CSPG5O95196 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.47■□□□□ 0.23
CSPG5O95196 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSPG5O95196 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 CYP2T1P-202ENST00000641596 2535 ntBASIC16.46■□□□□ 0.23
CSPG5O95196 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 AL023775.1-201ENST00000454907 1746 ntBASIC16.46■□□□□ 0.23
CSPG5O95196 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.46■□□□□ 0.23
CSPG5O95196 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.46■□□□□ 0.23
CSPG5O95196 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.46■□□□□ 0.23
CSPG5O95196 IMP3P2-201ENST00000489760 475 ntBASIC16.46■□□□□ 0.23
CSPG5O95196 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.46■□□□□ 0.23
CSPG5O95196 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.46■□□□□ 0.23
CSPG5O95196 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CSPG5O95196 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSPG5O95196 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG5O95196 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG5O95196 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG5O95196 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CSPG5O95196 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CSPG5O95196 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CSPG5O95196 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSPG5O95196 AL133267.1-201ENST00000398220 340 ntBASIC16.45■□□□□ 0.22
CSPG5O95196 CYP46A4P-201ENST00000414953 267 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms