Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 GNRHR2-203ENST00000581100 1187 ntBASIC15.48■□□□□ 0.07
PRAMEF11O60813 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.48■□□□□ 0.07
PRAMEF11O60813 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 AL138709.1-201ENST00000614840 1693 ntBASIC15.48■□□□□ 0.07
PRAMEF11O60813 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AC068587.6-202ENST00000641839 5619 ntBASIC15.47■□□□□ 0.07
PRAMEF11O60813 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AC106886.1-201ENST00000568660 600 ntBASIC15.47■□□□□ 0.07
PRAMEF11O60813 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PRAMEF11O60813 AC055811.4-201ENST00000624039 1754 ntBASIC15.47■□□□□ 0.07
PRAMEF11O60813 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PRAMEF11O60813 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.46■□□□□ 0.07
PRAMEF11O60813 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRAMEF11O60813 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms