Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF113AO15541 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF113AO15541 KRT43P-201ENST00000434019 910 ntBASIC18.3■□□□□ 0.52
RNF113AO15541 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF113AO15541 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 AC026434.2-201ENST00000506094 1078 ntBASIC18.3■□□□□ 0.52
RNF113AO15541 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF113AO15541 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF113AO15541 AC244669.2-201ENST00000612320 853 ntBASIC18.3■□□□□ 0.52
RNF113AO15541 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF113AO15541 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF113AO15541 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF113AO15541 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF113AO15541 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF113AO15541 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF113AO15541 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF113AO15541 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF113AO15541 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF113AO15541 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.29■□□□□ 0.52
RNF113AO15541 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF113AO15541 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF113AO15541 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 AC016694.1-201ENST00000434179 700 ntBASIC18.29■□□□□ 0.52
RNF113AO15541 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF113AO15541 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 AC007551.1-201ENST00000457394 519 ntBASIC18.29■□□□□ 0.52
RNF113AO15541 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 RAB43P1-201ENST00000561790 589 ntBASIC18.29■□□□□ 0.52
RNF113AO15541 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF113AO15541 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF113AO15541 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF113AO15541 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF113AO15541 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF113AO15541 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF113AO15541 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 AC132938.4-201ENST00000623835 848 ntBASIC18.28■□□□□ 0.52
RNF113AO15541 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms