Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.66□□□□□ -0.06
CLOCKO15516 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.66□□□□□ -0.06
CLOCKO15516 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLOCKO15516 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CLOCKO15516 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.66□□□□□ -0.06
CLOCKO15516 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.65□□□□□ -0.06
CLOCKO15516 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CLOCKO15516 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLOCKO15516 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.65□□□□□ -0.06
CLOCKO15516 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CLOCKO15516 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
CLOCKO15516 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.65□□□□□ -0.06
CLOCKO15516 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.65□□□□□ -0.06
CLOCKO15516 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 HMGN1P19-201ENST00000436976 333 ntBASIC14.65□□□□□ -0.06
CLOCKO15516 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.65□□□□□ -0.06
CLOCKO15516 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CLOCKO15516 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLOCKO15516 AC004449.1-201ENST00000564240 433 ntBASIC14.65□□□□□ -0.06
CLOCKO15516 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.65□□□□□ -0.06
CLOCKO15516 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.65□□□□□ -0.06
CLOCKO15516 AL161645.1-201ENST00000622716 1255 ntBASIC14.65□□□□□ -0.06
CLOCKO15516 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.65□□□□□ -0.06
CLOCKO15516 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CLOCKO15516 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.65□□□□□ -0.06
CLOCKO15516 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.65□□□□□ -0.06
CLOCKO15516 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CLOCKO15516 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLOCKO15516 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.07
CLOCKO15516 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
CLOCKO15516 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.64□□□□□ -0.07
CLOCKO15516 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.64□□□□□ -0.07
CLOCKO15516 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.64□□□□□ -0.07
CLOCKO15516 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 TSEN15P1-201ENST00000423257 515 ntBASIC14.64□□□□□ -0.07
CLOCKO15516 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 AC061975.2-201ENST00000581722 295 ntBASIC14.64□□□□□ -0.07
CLOCKO15516 AC024267.1-201ENST00000582320 895 ntBASIC14.64□□□□□ -0.07
CLOCKO15516 AC027612.4-201ENST00000605371 583 ntBASIC14.64□□□□□ -0.07
CLOCKO15516 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLOCKO15516 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.64□□□□□ -0.07
CLOCKO15516 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLOCKO15516 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms