Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
MID1O15344 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
MID1O15344 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MID1O15344 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MID1O15344 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.3■□□□□ 0.04
MID1O15344 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.3■□□□□ 0.04
MID1O15344 BTBD6P1-201ENST00000412176 1267 ntBASIC15.3■□□□□ 0.04
MID1O15344 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 AC245100.3-201ENST00000441281 285 ntBASIC15.3■□□□□ 0.04
MID1O15344 CNN2P10-201ENST00000443067 918 ntBASIC15.3■□□□□ 0.04
MID1O15344 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.3■□□□□ 0.04
MID1O15344 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.3■□□□□ 0.04
MID1O15344 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 AP006547.1-201ENST00000563435 692 ntBASIC15.3■□□□□ 0.04
MID1O15344 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.3■□□□□ 0.04
MID1O15344 AL118558.3-201ENST00000607414 1079 ntBASIC15.3■□□□□ 0.04
MID1O15344 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 REXO1L5P-201ENST00000622260 2098 ntBASIC15.3■□□□□ 0.04
MID1O15344 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MID1O15344 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
MID1O15344 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MID1O15344 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MID1O15344 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
MID1O15344 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.29■□□□□ 0.04
MID1O15344 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 AC104457.1-201ENST00000401024 814 ntBASIC15.29■□□□□ 0.04
MID1O15344 HLA-K-203ENST00000430151 1046 ntBASIC15.29■□□□□ 0.04
MID1O15344 AC007969.1-201ENST00000433675 447 ntBASIC15.29■□□□□ 0.04
MID1O15344 FAM8A4P-201ENST00000435433 1213 ntBASIC15.29■□□□□ 0.04
MID1O15344 MTX1P1-201ENST00000440904 838 ntBASIC15.29■□□□□ 0.04
MID1O15344 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.29■□□□□ 0.04
MID1O15344 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.29■□□□□ 0.04
MID1O15344 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.29■□□□□ 0.04
MID1O15344 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.29■□□□□ 0.04
MID1O15344 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
MID1O15344 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 EEF1DP1-201ENST00000585891 896 ntBASIC15.29■□□□□ 0.04
MID1O15344 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MID1O15344 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MID1O15344 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms