Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC004263.2-201ENST00000617183 678 ntBASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC005363.2-201ENST00000618631 242 ntBASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL138966.2-201ENST00000621997 464 ntBASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL023973.1-201ENST00000624619 620 ntBASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL031432.5-201ENST00000641059 760 ntBASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL357140.3-201ENST00000639753 1983 ntBASIC13.4□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC113347.1-201ENST00000413321 391 ntBASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MTCL1P1-201ENST00000446207 792 ntBASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 COX11P1-201ENST00000489116 835 ntBASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GCSHP2-201ENST00000560971 527 ntBASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LINC00638-201ENST00000555578 2518 ntBASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms